DamMapper
v0.6.0

DamID

  • DamID principle
  • Experimental considerations

Software requirements

  • Conda/Mamba
  • Snakemake
  • Apptainer
  • Snakefetch
  • Workflow installation

Usage

  • Preparing raw sequencing data
  • Sample meta data and analysis settings
  • Configuration of Snakemake
  • Dry-run of the analysis
  • Visualization of the workflow
  • Running the analysis
  • Report of the results
  • Archive of the analysis

Output files

  • Quality control
  • Visualization of damid-seq data
  • Peak-related plots

Citation

  • Workflow
  • Software used in workflow

Literature

  • DamID

Source code

  • Reporting issues
DamMapper
  • Search

© Copyright 2024, Niek Wit.

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